MetaboScape® Bibliography

MetaboScape® Bibliography 2024

Title Author Publication Link
Sodium doping and trapped ion mobility spectrometry improve lipid detection for novel MALDI-MSI analysis of oats Lau W.C.; Donnellan L. et al. Food Chemistry
Ultrasonic elastography for the prevention of breast implant rupture: Detection of an increase with stiffness over implantation time Ruffenach L.; Heintz D. et al. Journal of Biomechanics
Comprehensive characterization of organic compounds in indoor dust after generic sample preparation with SUPRAS and analysis by LC-HRMS/MS Ballesteros-Gómez A.; Ballesteros J. et al. Science of The Total Environment
Untargeted Metabolomics of Bladder Tissue using Liquid Chromatography and Quadrupole Time-of-Flight Mass Spectrometry for Cancer Biomarker Detection Nizioł J.; Ossoliński K. et al. Journal of Pharmaceutical and Biomedical Analysis
Untargeted 4D-metabolomics using Trapped Ion Mobility combined with LC-HRMS in extra virgin olive oil adulteration study with lower-quality olive oils Drakopoulou S.K.; Kritikou A.S. et al. Food Chemistry
Electronic cigarette vapor disrupts key metabolic pathways in human lung epithelial cells Assiri M.A.; Al Jumayi S.R. et al. Saudi Pharmaceutical Journal
The Circadian Metabolome of Atopic Dermatitis Ratley G.; Zeldin J. et al. Journal of Allergy and Clinical Immunology
Impact of Saccharomyces cerevisiae yeast inoculation mode on wine composition Bordet F.; Romanet R. et al. Food Chemistry
Protective role of fetal bovine serum on PLHC-1 spheroids exposed to a mixture of plastic additives: A lipidomic perspective Wang T.; Desmet J. et al. Toxicology in Vitro
Potential roles of HSYA in attenuating sepsis-induced liver injury through multi-omics analysis Pan B.; Yang Y. et al. Journal of Pharmaceutical and Biomedical Analysis
An acyl-CoA thioesterase is essential for the biosynthesis of a key dauer pheromone in C. elegans Bhar S.; Yoon C. et al. Cell Chemical Biology
Genomes of nine biofilm-forming filamentous strains of Cyanobacteria (genera Jaaginema, Scytonema, and Karukerafilum gen. nov.) isolated from mangrove habitats of Guadeloupe (Lesser Antilles) Halary S.; Duval C. et al. FEMS microbes
Determination of alkaloid-inspired molecule vindeburnol in rabbit plasma by UPLC–HRMS and its application to pharmacokinetic studies and preliminary metabolite identification Tsedilin A.; Borets L. et al. Journal of Pharmaceutical and Biomedical Analysis
Analysis of the phytochemical components of Prunella vulgaris using high‐performance liquid chromatography quadrupole time‐of‐flight mass spectrometry combined with molecular networking and assessment of their antioxidant and anti‐α‐glucosidase activities Cao L.; Li Y. et al. Biomedical Chromatography
Prostaglandin E2 controls the metabolic adaptation of T cells to the intestinal microenvironment Villa M.; Sanin D.E. et al. Nature Communications
Biosynthesis, herbivore induction, and defensive role of phenylacetaldoxime glucoside Müller A.T.; Nakamura Y. et al. Plant Physiology

MetaboScape® Bibliography 2023

Title Author Publication Link
Diisocyanates influence models of atopic dermatitis through direct activation of TRPA1 Yadav M.; Chaudhary P.P. et al. PLoS One
Exposure to isocyanates predicts atopic dermatitis prevalence and disrupts therapeutic pathways in commensal bacteria Zeldin J.; Chaudhary P.P. et al. Science Advances
Tandemly duplicated CYP82Ds catalyze 14-hydroxylation in triptolide biosynthesis and precursor production in Saccharomyces cerevisiae Zhang Y.; Gao J. et al. Nature Communications
Hepatic glutamine synthetase controls N 5-methylglutamine in homeostasis and cancer Villar V.H.; Allega M.F. et al. Nature Chemical Biology
Applications and continued evolution of glycan imaging mass spectrometry McDowell C.T.; Lu X. et al. Mass Spectrometry Reviews
Visualization of metabolites and microbes at high spatial resolution using MALDI mass spectrometry imaging and in situ fluorescence labeling Bourceau P.; Geier B. et al. Nature Protocols
Mass spectrometry imaging for biosolids characterization to assess ecological or health risks before reuse Villette C.; Maurer L. et al. Nature Communications
Spatial metabolomics principles and application to cancer research Planque M.; Igelmann S. et al. Current Opinion in Chemical Biology
Spatially resolved metabolites in stable and unstable human atherosclerotic plaques identified by mass spectrometry imaging Seeley E.H.; Liu Z. et al. Arteriosclerosis, thrombosis, and vascular biology
Recent Contributions of Mass Spectrometry-Based “Omics” in the Studies of Breast Cancer Banerjee S.; Hatimuria M. et al. Chemical Research in Toxicology
Multilayered regulation of developmentally programmed pre-anthesis tip degeneration of the barley inflorescence Shanmugaraj N.; Rajaraman J. et al. The Plant Cell
Strigolactones repress nodule development and senescence in pea Van Dingenen J.; De Keyser A. et al. The Plant Journal
Peptidomics Approach to Proteomics Hellinger R.; Sigurdsson A. et al. Nature Reviews Methods Primers
Metformin monotherapy alters the human plasma lipidome independent of clinical markers of glycemic control and cardiovascular disease risk in a type 2 diabetes clinical cohort Wancewicz B.; Zhu Y. et al. Journal of Pharmacology and Experimental Therapeutics
Dataset on metabolome dimorphism in different organs of mature Palaemon serratus prawn Marie B.; Coulaud R. et al. Data in Brief
Lipid oxidation induced protein scission in an oleogel as a model food Meissner P.M.; Keppler J.K. et al. Food Chemistry
Characterisation and localisation of plant metabolites involved in pharmacophagy in the turnip sawfly Brueggemann L.; Tewes L.J. et al. Plos one
Molecular, biochemical and metabolomics analyses reveal constitutive and pathogen-induced defense responses of two sugarcane contrasting genotypes against leaf scald disease Bini A.P.; Rossi G.D. et al. Plant Physiology and Biochemistry
Metabolomics profiling and chemoresistance mechanisms in ovarian cancer cell lines: Implications for targeting glutathione pathway Alarcon-Zapata P.; Perez A.J. et al. Life Sciences
Comparison of Data-Dependent Acquisition, Data-Independent Acquisition, and Parallel Reaction Monitoring in Trapped Ion Mobility Spectrometry–Time-of-Flight Tandem Mass Spectrometry-Based Lipidomics Rudt E.; Feldhaus M. et al. Analytical Chemistry
Insights on the Organ-Dependent, Molecular Sexual Dimorphism in the Zebra Mussel, Dreissena polymorpha, Revealed by Ultra-High-Performance Liquid Chromatography–Tandem Mass Spectrometry Metabolomics Lance E.; Sartor L. et al. Metabolites
The Nox2-ROS-Nlrp3 Inflammasome Signaling stimulates in the hematopoietic Stem/Progenitor cells lipogenesis to facilitate membrane lipid raft formation Abdelbaset-Ismail A.; Ciechanowicz A.K. et al. Stem Cell Reviews and Reports
A mass spectrum-oriented computational method for ion mobility-resolved untargeted metabolomics Luo M.; Yin Y. et al. Nature Communications
Time and dose-dependent impairment of liver metabolism in Gasterosteus aculeatus following exposure to diclofenac (DCF) highlighted by LC-HRMS untargeted metabolomics Lebeau-Roche E.; Daniele G. et al. Science of the Total Environment
Untargeted metabolomics discriminates grapes and wines from two syrah vineyards located in the same wine region Baleiras-Couto M.M.; Guedes R. et al. Fermentation
Anti-Hypercholesterolemia Effects of Edible Seaweed Extracts and Metabolomic Changes in Hep-G2 and Caco-2 Cell Lines Coelho M.; Pacheco R. Life
Untargeted urinary metabolomics for bladder cancer biomarker screening with ultrahigh-resolution mass spectrometry Nizioł J.; Ossoliński K. et al. Scientific Reports
Comparative LC-MS/MS-based molecular networking, DNA fingerprinting, and in vitro anti-Helicobacter pylori activity of three Egyptian Ficus cultivars Bakry S.M.; Naser A.F.A. et al. Journal of Pharmaceutical and Biomedical Analysis
Metabolomic analyses uncover an inhibitory effect of niclosamide on mitochondrial membrane potential in cholangiocarcinoma cells Kulthawatsiri T.; Kittirat Y. et al. PeerJ
Segregation of the genus Parahypoxylon (Hypoxylaceae, Xylariales) from Hypoxylon by a polyphasic taxonomic approach Cedeño-Sanchez M.; Charria-Girón E. et al. MycoKeys
Assessment of Xenoestrogens in Jordanian Water System: Activity and Identification Akkam Y.; Omari D. et al. Toxics
Selected Gut Bacteria from Water Monitor Lizard Exhibit Effects against Pathogenic Acanthamoeba castellanii Belonging to the T4 Genotype Akbar N.; Khan N.A. et al. Microorganisms
A comprehensive untargeted metabolomics study in zebrafish embryos exposed to perfluorohexane sulfonate (PFHxS) Xu M.; Legradi J. et al. Science of The Total Environment
Quantitative analysis of fatty acids and vitamin E and total lipid profiling of dietary supplements from the German market Zartmann A.; Völcker L. et al. European Food Research and Technology
Chemical characterization of virgin and recycled polyethylene terephthalate films used for food contact applications Bhattarai B.; Kusano Y. et al. European Food Research and Technology
Amesia hispanica sp. nov., Producer of the Antifungal Class of Antibiotics Dactylfungins Charria-Girón E.; Stchigel A.M. et al. Journal of Fungi
Metabolomics insights into the polyketide-lactones produced by Diaporthe caliensis sp. nov., an endophyte of the medicinal plant Otoba gracilipes Charria-Girón E.; Marin-Felix Y. et al. Microbiology Spectrum
Multi-Omics Profiling of Candida albicans Grown on Solid Versus Liquid Media Alhameed R.A.; Semreen M.H. et al. Microorganisms
Biodeterioration potential of algae on building materials-Model study Komar M.; Nowicka-Krawczyk P. et al. International Biodeterioration & Biodegradation
A combined liquid chromatography–trapped ion mobility–tandem high-resolution mass spectrometry and multivariate analysis approach for the determination of enzymatic reactivity descriptors in biomass hydrolysates Ramtanon I.; Berlioz-Barbier A. et al. Journal of Chromatography A
Infrared Laser-Based Selected Reaction Monitoring Mass Spectrometry Imaging of Banana (Musa spp.) Tissue—New Method for Detection and Spatial Localization of Metabolites in Food Nizioł J.; Misiorek M. et al. Food Analytical Methods
Cultivation of Melilotus officinalis as a source of bioactive compounds in association with soil recovery practices Nogues I.; Passatore L. et al. Frontiers in Plant Science
A retro-inverso modified peptide alleviated ovalbumin-induced asthma model by affecting glycerophospholipid and purine metabolism of immune cells Ma S.; Yang K. et al. Pulmonary Pharmacology & Therapeutics
Proteomic and metabolomic signatures of U87 glioblastoma cells treated with cisplatin and/or paclitaxel Ahmed M.; Semreen A.M. et al. Annals of Medicine
An Integrated Multi-OMICS Approach Highlights Elevated Non-Esterified Fatty Acids Impact BeWo Trophoblast Metabolism and Lipid Processing Easton Z.J.; Sarr O. et al. Metabolites
Maize kernel metabolome involved in resistance to fusarium ear rot and fumonisin contamination Cao A.; Gesteiro N. et al. Frontiers in Plant Science
Signal Response Evaluation Applied to Untargeted Mass Spectrometry Data to Improve Data Interpretability Overdahl K.E.; Collier J.B. et al. Journal of the American Society for Mass Spectrometry
Phytochemical profile of petals from black Dahlia pinnata by flow injection analysis–electrospray ionization–Fourier transform ion cyclotron resonance mass spectrometry Granados‐Balbuena S.Y.; Díaz‐Pacheco A. et al. Phytochemical Analysis
Pre-symbiotic response of the compatible host spruce and low-compatibility host pine to the ectomycorrhizal fungus Tricholoma vaccinum Ezediokpu M.N.; Halitschke R. et al. Frontiers in Microbiology
Evaluation of Two Simultaneous Metabolomic and Proteomic Extraction Protocols Assessed by Ultra-High-Performance Liquid Chromatography Tandem Mass Spectrometry Zenati R.A.; Giddey A.D. et al. International Journal of Molecular Sciences
Transcriptome, proteome and metabolome analysis provide insights on fat deposition and meat quality in pig Yu T.; Tian X. et al. Food Research International
Dissecting the effects of paraquat-induced pulmonary injury in rats using UPLC-Q-TOF-MS/MS-based metabonomics Liu X.; Li C. et al. Toxicology Research
Biological and chemical contamination of illegal, uncontrolled refuse storage areas in Poland Szulc J.; Nizioł J. et al. Environmental Research
Evaluating Software Tools for Lipid Identification from Ion Mobility Spectrometry–Mass Spectrometry Lipidomics Data Ross D.H.; Guo J. et al. Molecules
Toxicological effects of cyanobacterial metabolites on zebrafish larval development Jacinavicius F.R.; Geraldes V. et al. Harmful Algae
Discriminative Metabolomics Analysis and Cytotoxic Evaluation of Flowers, Leaves, and Roots Extracts of Matthiola longipetala subsp. livida Marzouk M.M.; Hegazi N.M. et al. Metabolites
Supramolecular solvent extraction and ambient mass spectrometry for the determination of organic contaminants in food packaging material Mas M.J.D.; de Dios-Pérez C. et al. Chemosphere
Four-dimensional trapped ion mobility spectrometry lipidomics for high throughput clinical profiling of human blood samples Lerner R.; Baker D. et al. Nature Communications
Development of fish liver PLHC-1 spheroids and its applicability to investigate the toxicity of plastic additives Wang T.; Desmet J. et al. Ecotoxicology and environmental safety
Comparison of nocturnal and diurnal metabolomes of rose flowers and leaves Zumsteg J.; Bossard E. et al. Metabolomics
Integrated plasma metabolomics and lipidomics profiling highlights distinctive signature of hepatocellular carcinoma in HCV patients Caponigro V.; Tornesello A.L. et al. Journal of Translational Medicine
Serum metabolomic profiling reveals potential biomarkers in systemic sclerosis Guo M.; Liu D. et al. Metabolism
Identifying antimicrobials and their metabolites in wastewater and surface water with effect-directed analysis Jonkers T.J.; Keizers P.H. et al. Chemosphere
Must protection, sulfites versus bioprotection: A metabolomic study Lebleux M.; Alexandre H. et al. Food Research International
From sugarcane to skin: Lignin as a multifunctional ingredient for cosmetic application Antunes F.; Mota I.F. et al. International Journal of Biological Macromolecules
Metabolomic fingerprint of cabbage resistance to Mamestra brassicae L.(Lepidoptera: Noctuidae) Rodriguez V.M.; Velasco P. et al. Pest management science
Identification of colupulone and lupulone as the main contributors to the antibacterial activity of hop extracts using activity-guided fractionation and metabolome analysis Li Y.; Dalabasmaz S. et al. Food Research International
Phenolic acids-rich fraction from Ficus drupacea leaves for the prevention and treatment of ethanol-induced gastric mucosal injury in rats Bakry S.M.; Naser A.F.A. et al. Inflammopharmacology
Green Nanotechnology of Yucca filamentosa-Phytochemicals-Functionalized Gold Nanoparticles—Antitumor Efficacy Against Prostate and Breast Cancers Thipe V.C.; Jatar A. et al. Nanotechnology, Science and Applications
Sub-5-min RP-UHPLC-TIMS for high-throughput untargeted lipidomics and its application to multiple matrices Merciai F.; Basilicata M.G. et al. Analytical and Bioanalytical Chemistry
Antimony Compounds Associate with Atopic Dermatitis and Influence Models of Itch and Dysbiosis Zeldin J.; Tran T.T. et al. Environmental Science & Technology Letters
Unveiling plant defense arsenal: metabolic strategies in Brassica oleracea during black rot disease Vega-Álvarez C.; Soengas P. et al. Horticulture Research
Berberis microphylla G. Forst Intake Reduces the Cardiovascular Disease Plasmatic Markers Associated with a High-Fat Diet in a Mice Model Olivares-Caro L.; Nova-Baza D. et al. Antioxidants
First Description of Non-Enzymatic Radical-Generating Mechanisms Adopted by Fomitiporia mediterranea: An Unexplored Pathway of the White Rot Agent of the Esca Complex of Diseases Moretti S.; Goddard M. et al. Journal of Fungi
Phytochemical Analysis and Antiproliferative Activity of Ulex gallii Planch.(Fabaceae), a Medicinal Plant from Galicia (Spain) Bada L.; Pereira R.B. et al. Molecules
Omic Studies on the Effect of Fucus vesiculosus on Differentiated Caco-2 Cells: A Potential Functional Food André R.; Pacheco R. et al.
Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom Gallet A.; Halary S. et al. Microbiome
Attenuation and soil biodegradation of fungicides by using vegetated buffer strips in vineyards during a simulated rainfall–runoff event Ortega P.; Escolà Casas M. et al. Environmental Science and Pollution Research
Identification of antimicrobial and glucocorticoid compounds in wastewater effluents with effect-directed analysis Jonkers T.J.; Houtman C.J. et al. Environmental Research
Supramolecular-solvent based extraction of hydroxytyrosol from brines of the processing of table olives Ballesteros-Gómez A.; Serrano-Crespín A. et al. Separation and Purification Technology
Mass spectrometric analysis of bioactive conditioned media of bacteria isolated from reptilian gut Siddiqui R.; Akbar N. et al. Future Science OA
Dynamic changes of serum metabolite profiling in septic mice based on high performance liquid chromatography of quadrupole time of flight mass spectrometry analysis Li S.; Zeng Q. et al. European Journal of Mass Spectrometry
High-Resolution Mass Spectrometry-Based Metabolomics for Increased Grape Juice Metabolite Coverage Nicolas S.; Bois B. et al. Foods
Uncovering the secrets of monoculture yield decline: trade‐offs between leaf and root chemical and physical defence traits in a grassland experiment Bassi L.; Hennecke J. et al. Oikos
First study on the root endophytic fungus Trichoderma hamatum as an entomopathogen: Development of a fungal bioinsecticide against cotton leafworm (Spodoptera littoralis) Lana M.; Simón O. et al. Microbiological Research
Bioprotection Efficiency of Metschnikowia Strains in Synthetic Must: Comparative Study and Metabolomic Investigation of the Mechanisms Involved Puyo M.; Mas P. et al. Foods
Thiamine and Biotin: Relevance in the Production of Volatile and Non-Volatile Compounds during Saccharomyces cerevisiae Alcoholic Fermentation in Synthetic Grape Must Evers M.S.; Roullier-Gall C. et al. Foods
Plasma metabolomics profiling identifies new predictive biomarkers for disease severity in COVID-19 patients Soares N.C.; Hussein A. et al. Plos one
Automatization of metabolite extraction for high-throughput metabolomics: case study on transgenic isoprene-emitting birch Bertić M.; Zimmer I. et al. Tree Physiology
Metabolomic analysis of the inhibitory effect of phthalates and bisphenol A on the antioxidant activity of vitamin D in human samples using liquid chromatography–mass spectrometry Lee J.H.; Gwon M. et al. Journal of Chromatography B
Experimental evidence and clinical implications of Warburg effect in the skeletal muscle of Fabry disease Gambardella J.; Fiordelisi A. et al. Iscience
Mass spectrometry-based metabolomics approach and in vitro assays revealed promising role of 2, 3-dihydroquinazolin-4 (1H)-one derivatives against colorectal cancer cell lines Dahabiyeh L.A.; Hudaib F. et al. European Journal of Pharmaceutical Sciences
Burkholderia pseudomallei biofilm resists Acanthamoeba sp. grazing and produces 8-O-4′-diferulic acid, a superoxide scavenging metabolite after passage through the amoeba Bunma C.; Noinarin P. et al. Scientific Reports
Dehydroepiandrosterone supplementation and the impact of follicular fluid metabolome and cytokinome profiles in poor ovarian responders Viardot-Foucault V.; Zhou J. et al. Journal of Ovarian Research
Insight into the mechanisms of therapeutic hypothermia for asphyxia cardiac arrest using a comprehensive approach of GC-MS/MS and UPLC-Q-TOF-MS/MS based on serum metabolomics Zhang Y.; Feng Y. et al. Heliyon
Influence of spontaneous,“pied de cuve” and commercial dry Yeast fermentation strategies on wine molecular composition and sensory properties Álvarez-Barragán J.; Mallard J. et al. Food Research International
Lipidomics based on liquid chromatography‐high resolution mass spectrometry reveals the protective role of peroxisome proliferator‐activated receptor alpha on kidney stone formation in mice treated with glyoxylate Chao Y.; Li N. et al. Journal of Separation Science
How do barley plants with impaired photosynthetic light acclimation survive under high-light stress? Saeid Nia M.; Scholz L. et al. Planta
Anticancer activity and metabolic alteration in colon and prostate cancer cells by novel moxifloxacin conjugates with fatty acids Chrzanowska A.; Kurpios-Piec D. et al. European Journal of Pharmacology
Physical activity‐induced alterations of the gut microbiota are BMI dependent Shah S.; Mu C. et al. The FASEB Journal
Leaf and root chemical and physical defence traits mediate monoculture yield decline in a grassland experiment Bassi L.; Hennecke J. et al. Authorea
Plant metabolites modulate animal social networks and lifespan Singh P.; Brueggemann L. et al. bioRxiv
Crude Extracts of Talaromyces Strains (Ascomycota) Affect Honey Bee (Apis mellifera) Resistance to Chronic Bee Paralysis Virus Vocadlova K.; Lamp B. et al. Viruses
Mechanistic insights into the biological activity of S-Sulfocysteine in CHO cells using a multi-omics approach Nguyen M.; Le Mignon M. et al. Frontiers in Bioengineering and Biotechnology
Nonpolar Lipids Contribute to Midday Fogging During Scleral Lens Wear Walker M.K.; Bailey L.S. et al. Investigative Ophthalmology & Visual Science
Population divergence in heat and drought responses of a coastal plant: from metabolic phenotypes to plant morphology and growth Schrieber K.; Gluesing S. et al. Journal of Experimental Botany
Meta-metabolomic Responses of River Biofilms to Cobalt Exposure and Use of Dose-response Model Trends as an Indicator of Effects Colas S.; Marie B. et al. bioRxiv
Melatonin reduces pink rib discoloration in wounded lettuce midribs Belisle C.E.; Sargent S.A. et al. Postharvest Biology and Technology
Metabolome expression in Eucryphia cordifolia populations: Role of seasonality and ecological niche centrality hypothesis Fuica-Carrasco C.; Toro-Núñez Ó. et al. Journal of Plant Research
Ultra-High-Resolution Liquid Chromatography Coupled with Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry Analysis of Tessaria absinthioides (Hook. & Arn.) DC.(Asteraceae) and Antioxidant and Hypocholesterolemic Properties Rey M.; Kruse M.S. et al. Antioxidants
A palmitate-rich metastatic niche enables metastasis growth via p65 acetylation resulting in pro-metastatic NF-κB signaling Altea-Manzano P.; Doglioni G. et al. Nature Cancer
European oak metabolites shape digestion and fitness of the herbivore Tortrix viridana Bertić M.; Orgel F. et al. Functional Ecology
Repair of airway epithelia requires metabolic rewiring towards fatty acid oxidation Crotta S.; Villa M. et al. Nature Communications
Molecular Signatures of the Eagle Effect Induced by the Artificial Siderophore Conjugate LP-600 in E. coli Lai Y.; Franke R. et al. ACS Infectious Diseases
Multi-omics analysis of Bacillus. subtilis spores formed at different environmental temperatures reveal differences at the morphological and molecular level. Huang Y.; Roseboom W. et al. bioRxiv
A Prospective Analysis of the Metyrapone Short Test Using Targeted and Untargeted Metabolomics Seoudy A.K.; Schlicht K. et al. Neuroendocrinology
Disturbed Plasma Lipidomic Profiles in Females with Diffuse Large B-Cell Lymphoma: A Pilot Study Masnikosa R.; Pirić D. et al. Cancers
Metabolite alterations in zebrafish embryos exposed to hydroxylated polybrominated diphenyl ethers Gustafsson J.; Legradi J. et al. Science of the Total Environment
Integrated multi‐omics analysis reveals unique signatures of paclitaxel‐loaded poly (lactide‐co‐glycolide) nanoparticles treatment of head and neck cancer cells Haider M.; Jagal J. et al. Proteomics
Evaluation and Comparison of Dermo-Cosmetic Activities of Three Oak Species by Targeting Antioxidant Metabolites and Skin Enzyme Inhibitors Buche G.; Laffon M. et al. Metabolites
Unravelling the Phytotoxic Effects of Glyphosate on Sensitive and Resistant Amaranthus palmeri Populations by GC–MS and LC–MS Metabolic Profiling Zulet-Gonzalez A.; Gorzolka K. et al. Plants
Impact of electrolyte decomposition products on the electrochemical performance of 4 V class K-ion batteries Hosaka T.; Matsuyama T. et al. Chemical Science
Bioprospecting a Film-Forming System Loaded with Eugenia uniflora L. and Tropaeolum majus L. Leaf Extracts for Topical Application in Treating Skin Lesions Dalmagro M.; Pinc M.M. et al. Pharmaceuticals
Effects of medwakh smoking on salivary metabolomics and its association with altered oral redox homeostasis among youth Aghila Rani K.; Soares N.C. et al. Scientific Reports
Metabolic engineering of p‐hydroxybenzoate in poplar lignin Mottiar Y.; Karlen S.D. et al. Plant Biotechnology Journal
Structure Elucidation and Biosynthesis of Nannosterols A and B, Myxobacterial Sterols from Nannocystis sp. MNa10993 Akone S.H.; Hug J.J. et al. Journal of Natural Products
Illuminating the oral microbiome and its host interactions: recent advancements in omics and bioinformatics technologies in the context of oral microbiome research Baker J.L. FEMS Microbiology Reviews
Distinct metabolite classes in root exudates are indicative for field-or hydroponically-grown cover crops Heuermann D.; Döll S. et al. Frontiers in Plant Science
Blue‐green fluorescence during hypersensitive cell death arises from phenylpropanoid deydrodimers Kanawati B.; Bertic M. et al. Plant Direct
Both age and social environment shape the phenotype of ant workers Quque M.; Brun C. et al. Scientific Reports
Analytical approaches for screening of per-and poly fluoroalkyl substances in food items: A review of recent advances and improvements Ogunbiyi O.D.; Ajiboye T.O. et al. Environmental Pollution
Untargeted metabolomics analysis of four date palm (Phoenix dactylifera L.) cultivars using MS and NMR Alsuhaymi S.; Singh U. et al. Natural Products and Bioprospecting
Defining atherosclerotic plaque biology by mass spectrometry-based omics approaches Chandran M.; Sudhina S. et al. Molecular Omics
GC× GC and computational strategies for detecting and analyzing environmental contaminants Ieda T.; Hashimoto S. TrAC Trends in Analytical Chemistry
Multi-Omics Analysis of Circulating Exosomes in Adherent Long-Term Treated OSA Patients Khalyfa A.; Marin J.M. et al. International Journal of Molecular Sciences
Data‐Driven Compound Identification in Atmospheric Mass Spectrometry Sandström H.; Rissanen M. et al. Advanced Science
Phosphoinositide acyl chain saturation drives CD8+ effector T cell signaling and function Edwards-Hicks J.; Apostolova P. et al. Nature Immunology
Phytochemical Profiling, Antioxidant and Tyrosinase Regulatory Activities of Extracts from Herb, Leaf and In Vitro Culture of Achillea millefolium (Yarrow) Czech K.; Gaweł-Bęben K. et al. Molecules
Molecular networking as a natural products discovery strategy Zhang M.; Otsuki K. et al. Acta Materia Medica
The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina Pruvost M.; Patzig J. et al. Cell reports
Serum metabolomic analyses reveal the potential metabolic biomarkers for prediction of amatoxin poisoning Liu Y.; Li S. et al. Toxicon
An Exploratory Study of the Metabolite Profiling from Pesticides Exposed Workers Nolasco D.M.; Mendes M.P. et al. Metabolites

MetaboScape® Bibliography 2022

Title Author Publication Link
Multi-Omics Analysis Revealed a Significant Alteration of Critical Metabolic Pathways Due to Sorafenib-Resistance in Hep3B Cell Lines Abushawish K.Y.I.; Soliman S.S.M. et al. 2022 Int. J. Mol. Sci.
Untargeted Metabolomics of Breast Cancer Cells MCF-7 and SkBr3 Treated With Tamoxifen/Trastuzumab Sharaf B.M.; Giddey A.D. et al. 2022 Cancer Genomics & Proteomics
Untargeted lipidomics reveals specific lipid profiles in COVID-19 patients with different severity from Campania region (Italy) Ciccarelli M.; Merciai F. et al. 2022 J. Pharm. Bio. Anal.
Development and application of a fast ultra-high performance liquid chromatography-trapped ion mobility mass spectrometry method for untargeted lipidomics Merciai F.; Musella S. et al. 2022 J Chrom A
Untargeted ultra‑high‑resolution mass spectrometry metabolomic profiling of blood serum in bladder cancer Nizioł J.; Ossoliński K. et al. 2022 Nature Scientific Reports
Untargeted Metabolomic Plasma Profiling of Emirati Dialysis Patients with Diabetes versus Non-Diabetic: A Pilot Study Banimfreg B.H.; Alshraideh H. et al. 2022 Biomolecules
Impact of Skin Tissue Collection Method on Downstream MALDI-Imaging Yadav M.; Chaudhary P.P. et al. 2022 Metabolites
Thorough Investigation of the Phenolic Profile of Reputable Greek Honey Varieties: Varietal Discrimination and Floral Markers Identification Using Liquid Chromatography–High-Resolution Mass Spectrometry Koulis G.A.; Tsagkaris A.S. et al. 2022 Molecules
Structural amyloid plaque polymorphism is associated with distinct lipid accumulations revealed by trapped ion mobility mass spectrometry imaging Michno W.; Wherli P.M. et al. 2022 J of Neurochemistry
Bioprospecting the Metabolome of Plant Urtica dioica L.: A Fast Dereplication and Annotation Workflow in Plant Metabolomics Bhattarai K.; Paudel B. et al. 2022 Evidence-Based Complementary and Alternative Medicine
Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers Stopka S.A.; van der Reest J. et al. 2022 PLoS One
Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra Huang F.; Bailey L.S. et al. 2022 ACS Omega
Non-Targeted Serum Lipidomics Analysis and Potential Biomarkers of Laryngeal Cancer Based on UHPLC-QTOF-MS Wang H.; Luo Y. et al. 2022 Metabolites
Metabolism Reorganization in Kale (Brassica oleracea L. var acephala) Populations with Divergent Glucosinolate Content under Thermal Stresses Díaz-Urbano M.; Velasco P. et al. 2022 Agronomy
Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers Stopka S.A.; van der Reest J. et al. Plos one
MALDI Mass Spectrometry Imaging highlights specific metabolome and lipidome profiles in salivary gland tumor tissues Sommella E.; Salviati E. et al. Metabolites
Spatially Resolved Metabolites in Stable and Vulnerable Human Atherosclerotic Plaques Identified by Mass Spectrometry Imaging Seeley E.H.; Liu Z. et al. bioRxiv
Structural amyloid plaque polymorphism is associated with distinct lipid accumulations revealed by trapped ion mobility mass spectrometry imaging Michno W.; Wehrli P.M. et al. Journal of Neurochemistry
Impact of Skin Tissue Collection Method on Downstream MALDI-Imaging Yadav M.; Chaudhary P.P. et al. Metabolites
Untargeted ultra-high-resolution mass spectrometry metabolomic profiling of blood serum in bladder cancer Nizioł J.; Ossoliński K. et al. Scientific Reports
Development of approach for flavonoid profiling of biotechnological raw materials Iris sibirica L. by HPLC with high‐resolution tandem mass spectrometry Karpitskiy D.A.; Bessonova E.A. et al. Phytochemical Analysis
Untargeted metabolomics of breast cancer cells MCF-7 and SkBr3 treated with tamoxifen/trastuzumab Sharaf B.M.; Giddey A.D. et al. Cancer Genomics & Proteomics
Untargeted metabolomic plasma profiling of emirati dialysis patients with diabetes versus non-diabetic: A pilot study Banimfreg B.H.; Alshraideh H. et al. Biomolecules
Microbiota independent effects of oligosaccharides on Caco-2 cells-A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis Jensen-Kroll J.; Demetrowitsch T. et al. Frontiers in molecular biosciences
Constitutive and inducible defense in Eucalyptus determines the feeding host of Gonipterus platensis, denoting specific plant-insect coevolution and a strategy for resistance improvement Campos J.V.; Riquelme S. et al. Industrial Crops and Products
Untargeted approach to investigating the metabolomics profile of type 2 diabetes emiratis Banimfreg B.H.; Shamayleh A. et al. Journal of Proteomics
Saliva metabolomic profile of COVID-19 patients associates with disease severity Saheb Sharif-Askari N.; Soares N.C. et al. Metabolomics
Bioprospecting the metabolome of plant Urtica dioica L.: a fast dereplication and annotation workflow in plant metabolomics Bhattarai K.; Paudel B. et al. Evidence-Based Complementary and Alternative Medicine
Thorough investigation of the phenolic profile of reputable greek honey varieties: varietal discrimination and floral markers identification using liquid chromatography–high-resolution mass spectrometry Koulis G.A.; Tsagkaris A.S. et al. Molecules
Mass spectroscopy-based proteomics and metabolomics analysis of triple-positive breast cancer cells treated with tamoxifen and/or trastuzumab Sharaf B.M.; Giddey A.D. et al. Cancer Chemotherapy and Pharmacology
Non-targeted serum Lipidomics Analysis and potential biomarkers of Laryngeal Cancer based on UHPLC-QTOF-MS Wang H.; Luo Y. et al. Metabolites
Release of Small Phenolic Metabolites from Isotopically Labeled 13C Lignin in the Pig Cecum Model Kasimir M.; Behrens M. et al. Journal of Agricultural and Food Chemistry
Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra Huang F.; Bailey L.S. et al. ACS omega
Microbiota independent effects of oligosaccharides on Caco-2 cells -A semi-targeted metabolomics approach using DI-FT-ICR-MS coupled with pathway enrichment analysis Jensen-Kroll J.; Demetrowitsch T. Frontiers in molecular biosciences
Metabolomic Study of Urine from Workers Exposed to Low Concentrations of Benzene by UHPLC-ESI-QToF-MS Reveals Potential Biomarkers Associated with Oxidative Stress and Genotoxicity Mendes M.P.; Paiva M.J.N. et al. Metabolites
Metabolism Reorganization in Kale (Brassica oleracea L. var acephala) Populations with Divergent Glucosinolate Content under Thermal Stresses Díaz-Urbano M.; Velasco P. et al. Agronomy
Tree species richness differentially affects the chemical composition of leaves, roots and root exudates in four subtropical tree species Weinhold A.; Döll S. et al. Journal of Ecology
IVS I-5 (G> C) is associated with changes to the RBC membrane lipidome in response to hydroxyurea treatment in β-thalassemia patients Khan M.B.N.; Iftikhar F. et al. Molecular Omics
Integrated multi-omic analysis of fruit maturity identifies biomarkers with drastic abundance shifts spanning the harvest period in ‘Royal Gala’apple Favre L.; Hunter D.A. et al. Postharvest Biology and Technology
Trapped ion mobility spectrometry-mass spectrometry improves the coverage and accuracy of four-dimensional untargeted lipidomics Chen X.; Yin Y. et al. Analytica Chimica Acta
A dietary carbohydrate–gut Parasutterella–human fatty acid biosynthesis metabolic axis in obesity and type 2 diabetes Henneke L.; Schlicht K. et al. Gut microbes
Multi-omics analysis revealed a significant alteration of critical metabolic pathways due to sorafenib-resistance in Hep3b cell lines Abushawish K.Y.; Soliman S.S. et al. International Journal of Molecular Sciences
XMN polymorphism along with HU administration renders alterations to RBC membrane lipidome in β-thalassemia patients Khan M.B.N.; Iftikhar F. et al. Chemistry and Physics of Lipids
Application of a hybrid zwitterionic hydrophilic interaction liquid chromatography column in metabolic profiling studies Lioupi A.; Virgiliou C. et al. Journal of Chromatography A
Elucidating the mechanism behind and investigating the efficacy of Traditional Chinese Medicine and Traditional Tibetan Medicine in combination with standard therapeutics in hepatocellular carcinoma and cholangiocarcinoma in vitro Suo H.; Hochnadel I. et al. Frontiers in Pharmacology
In vivo characterization of key iridoid biosynthesis pathway genes in catnip (Nepeta cataria) Palmer L.; Chuang L. et al. Planta
Graph Properties of Mass-Difference Networks for Profiling and Discrimination in Untargeted Metabolomics Traquete F.; Luz J. et al. Frontiers in Molecular Biosciences
DEIMoS: an open-source tool for processing high-dimensional mass spectrometry data Colby S.M.; Chang C.H. et al. Analytical Chemistry
Plant responses underlying timely specialized metabolites induction of Brassica crops Doghri M.; Rodríguez V.M. et al. Frontiers in Plant Science
MetEx: A Targeted Extraction Strategy for Improving the Coverage and Accuracy of Metabolite Annotation in Liquid Chromatography–High-Resolution Mass Spectrometry Data Zheng F.; You L. et al. Analytical Chemistry
Nematode-induced variations in phloem metabolome affecting aphid performance aboveground Leonar A.L. Phytochemistry
Discovery, Biosynthesis and Biological Activity of a Succinylated Myxochelin from the Myxobacterial Strain MSr12020 Okoth D.A.; Hug J.J. et al. Microorganisms
Metabolic profiling as a powerful tool for the analysis of cellular alterations caused by 20 mycotoxins in HepG2 cells Gerdemann A.; Behrens M. et al. Archives of toxicology
Crithmum maritimum seeds, a potential source for high-quality oil and phenolic compounds in soils with no agronomical relevance Martins-Noguerol R.; Perez-Ramos I.M. et al. Journal of Food Composition and Analysis
Comparative anticancer potentials of taxifolin and quercetin methylated derivatives against HCT-116 cell lines: effects of O-methylation on taxifolin and quercetin as preliminary natural leads Mohammed H.A.; Almahmoud S.A. et al. ACS omega
Integrated analysis of plasma and urine reveals unique metabolomic profiles in idiopathic inflammatory myopathies subtypes Liu D.; Zhao L. et al. Journal of Cachexia, Sarcopenia and Muscle
Metabolomic profiling identifies biomarkers and metabolic impacts of surgery for colorectal cancer Zhuang F.; Bai X. et al. Frontiers in Surgery
Sirex noctilio infestation led to inevitable pine death despite activating pathways involved in tolerance Riquelme S.; Campos J.V. et al. Phytochemistry
Metabolomics Analysis Revealed Significant Metabolic Changes in Brain Cancer Cells Treated with Paclitaxel and/or Etoposide Semreen A.M.; Alsoud L.O. et al. International Journal of Molecular Sciences
High-Performance data processing workflow incorporating effect-directed analysis for feature prioritization in suspect and nontarget screening Jonkers T.J.; Meijer J. et al. Environmental Science & Technology
Untargeted lipidomics reveals specific lipid profiles in COVID-19 patients with different severity from Campania region (Italy) Ciccarelli M.; Merciai F. et al. Journal of Pharmaceutical and Biomedical Analysis
Assessment of Physicochemical, Microbiological and Toxicological Hazards at an Illegal Landfill in Central Poland Szulc J.; Okrasa M. et al. International journal of environmental research and public health
Characterizing the degradation of cannabidiol in an e-liquid formulation Schwarzenberg A.; Carpenter H. et al. Scientific Reports
Data Analysis Strategies in CE–MS for Metabolomics Drouin N.; Boccard J. et al. Capillary Electrophoresis‐Mass Spectrometry for Proteomics and Metabolomics: Principles and Applications
Mixed-mode chromatography-mass spectrometry enables targeted and untargeted screening of carboxylic acids in biological samples Hodek O.; Argemi-Muntadas L. et al. Analytical Methods
Optimization of the sulfo-phospho-vanillin assay for total lipid normalization in untargeted quantitative lipidomic LC–MS/MS applications Bailey L.S.; Prajapati D.V. et al. Analytical Chemistry
Vitamin C and Omega-3 Fatty Acid Intake Is Associated with Human Periodontitis—A Nested Case-Control Study Mewes L.; Knappe C. et al. Nutrients
Development and application of a fast ultra-high performance liquid chromatography-trapped ion mobility mass spectrometry method for untargeted lipidomics Merciai F.; Musella S. et al. Journal of Chromatography A
Fish metabolome from sub-urban lakes of the Paris area (France) and potential influence of noxious metabolites produced by cyanobacteria Marie B.; Gallet A. Chemosphere
Carissa edulis Vahl (Apocynaceae) extract, a medicinal plant of Benin pharmacopoeia, induces potent endothelium-dependent relaxation of coronary artery rings involving nitric oxide Hounguè U.; Villette C. et al. Phytomedicine
The metabolomic profile in amyotrophic lateral sclerosis changes according to the progression of the disease: An exploratory study Marino C.; Grimaldi M. et al. Metabolites
Eusociality is linked to caste-specific differences in metabolism, immune system, and somatic maintenance-related processes in an ant species Quque M.; Villette C. et al. Cellular and Molecular Life Sciences
An Aminopyrimidone and Aminoimidazoles Alkaloids from the Rodrigues Calcareous Marine Sponge Ernsta naturalis Campos P.; Herbette G. et al. Marine drugs
Comparative Evaluation of Different Targeted and Untargeted Analytical Approaches to Assess Greek Extra Virgin Olive Oil Quality and Authentication Drakopoulou S.; Orfanakis E. et al. Molecules
Differential effects of obesity, hyperlipidaemia, dietary intake and physical inactivity on type I versus type IV allergies Rohmann N.; Munthe L. et al. Nutrients
Tailoring composition and nanostructures in supramolecular solvents: Impact on the extraction efficiency of polyphenols from vegetal biomass Sánchez-Vallejo C.; Ballesteros-Gómez A. et al. Separation and Purification Technology
Validation of the traditional medicinal use of a Mexican endemic orchid (Prosthechea karwinskii) through UPLC-ESI-qTOF-MS/MS characterization of its bioactive compounds Barragán-Zarate G.S.; Lagunez-Rivera L. et al. Heliyon
Analysis of Muscle Lipidome in Juvenile Rainbow Trout Fed Rapeseed Oil and Cochayuyo Meal Quiñones J.; Díaz R. et al. Biomolecules
The Trisubstituted Isoxazole MMV688766 Exerts Broad-Spectrum Activity against Drug-Resistant Fungal Pathogens through Inhibition of Lipid Homeostasis Puumala E.; Zaslaver O. et al. Mbio
Dynamic changes of serum metabolites associated with infection and severity of patients with acute hepatitis E infection Wu J.; Xu Y. et al. Journal of Medical Virology
Molecular and metabolic alterations of 2, 3-dihydroquinazolin-4 (1 H)-one derivatives in prostate cancer cell lines Dahabiyeh L.A.; Hourani W. et al. Scientific Reports
Biosynthesis and antifungal activity of fungus-induced O-methylated flavonoids in maize Förster C.; Handrick V. et al. Plant physiology
Unveiling the mechanism of action of nature-inspired anti-cancer compounds using a multi-omics approach Soares N.C.; Ali A. et al. Journal of Proteomics
Multicomponent bioactive extract from red stage Haematococcus pluvialis wet paste: avoiding the drying step and toxic solvents Castillo A.; Pereira S. et al. Journal of Applied Phycology
Biological and Chemical Contamination of Air, Water and Soil in Illegal, Uncontrolled Refuse Storage Areas in Poland Szulc J.; Nizioł J. et al. Water and Soil in Illegal, Uncontrolled Refuse Storage Areas in Poland
In vitro α-glucosidase inhibitory activity of Tamarix nilotica shoot extracts and fractions Daou M.; Elnaker N.A. et al. Plos one
Valorization of spent sugarcane fermentation broth as a source of phenolic compounds Oliveira C.M.; Horta B. et al. Processes
Gut Microbiota Associated with Gestational Health Conditions in a Sample of Mexican Women Benítez-Guerrero T.; Vélez-Ixta J.M. et al. Nutrients
The Arabidopsis thaliana–Streptomyces interaction is controlled by the metabolic status of the holobiont Graindorge S.; Villette C. et al. International Journal of Molecular Sciences
In Vitro and In Vivo Antidiabetic Activity, Phenolic Content and Microscopical Characterization of Terfezia claveryi Abu-Odeh A.; Shehadeh M. et al. Molecules
Segmental bronchial allergen challenge elicits distinct metabolic phenotypes in allergic asthma Zhu Y.; Esnault S. et al. Metabolites
Exploring native Scutellaria species provides insight into differential accumulation of flavones with medicinal properties Costine B.; Zhang M. et al. Scientific Reports
Molecular Network Guided Cataloging of the Secondary Metabolome of Selected Egyptian Red Sea Soft Corals Hegazi N.M.; Mohamed T.A. et al. Marine Drugs
Identification of Insulin Resistance Biomarkers in Metabolic Syndrome Detected by UHPLC-ESI-QTOF-MS Alsoud L.O.; Soares N.C. et al. Metabolites
Valorization of Spent Sugarcane Fermentation Broth as a Source of Phenolic Compounds. Processes 2022, 10, 1339 Oliveira C.; Horta B. et al. Processes
Recent advances in understanding of Alzheimer’s disease progression through mass spectrometry-based metabolomics Mill J.; Li L. Phenomics
A combination of metabolomics and machine learning results in the identification of a new cyst nematode hatching factor Vlaar L.E.; Thiombiano B. et al. Metabolites
Cell wall strengthening by phenylpropanoid dehydrodimers during the plant hypersensitive cell death Kanawati B.; Bertic M. et al. bioRxiv
Single-Cell Mass Spectrometry of Metabolites and Proteins for Systems and Functional Biology Portero E.P.; Pade L.R. et al. Single Cell ‘Omics of Neuronal Cells
A Liquid Chromatography-Mass Spectrometry Method to Study the Interaction between Membrane Proteins and Low-Molecular-Weight Compound Mixtures Ogiso H.; Suno R. et al. Molecules
Congenital iRHOM2 deficiency causes ADAM17 dysfunction and environmentally directed immunodysregulatory disease Kubo S.; Fritz J.M. et al. Nature Immunology
Social environment and chronological age shape eusocial insect species: the case of the ant workers Quque M.; Brun C. et al.
AP-4-mediated axonal transport controls endocannabinoid production in neurons Davies A.K.; Alecu J.E. et al. Nature Communications
Untargeted Metabolomics of S treptomyces Species Isolated from Soils of Nepal Bhattarai B.R.; Khadayat K. et al. Processes
Metabolomic Study on Tridacna maxima Giant Clams Reveals Metabolic Fingerprint of Environmental Pollutants Almulhim F.; Rossbach S. et al. Frontiers in Marine Science
Mass spectrometry-based nontargeted and targeted analytical approaches in fingerprinting and metabolomics of food and agricultural research Liu Z.; Zhang M. et al. Journal of Agricultural and Food Chemistry
Metabolomics-assisted discovery of a new anticancer GLS-1 inhibitor chemotype from a nortopsentin-inspired library: From phenotype screening to target identification Carbone D.; Vestuto V. et al. European Journal of Medicinal Chemistry
Ion mobility mass spectrometry in the omics era: Challenges and opportunities for metabolomics and lipidomics Paglia G.; Smith A.J. et al. Mass spectrometry reviews

MetaboScape® Bibliography 2021

Title Author Publication Link
Expanding the Scope of Detectable Microbial Natural Products by Complementary Analytical Methods and Cultivation Systems Bader C.D.; Haack P.A. et al. 2021 J. Nat. Prod.
Metabolic Dynamics of In Vitro CD8+ T Cell Activation Edwards-Hicks J.; Mitterer M. et al. 2021 Metabolites
Complementing Matrix-Assisted Laser Desorption Ionization-Mass Spectrometry Imaging with Chromatography Data for Improved Assignment of Isobaric and Isomeric Phospholipids Utilizing Trapped Ion Mobility-Mass Spectrometry Helmer P.O.; Nordhorn I.D.; et al. 2021 Anal. Chem.
Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS Maurer L.; Villette C. et al. 2021 Water Res.
Analysis of the metabolic switch induced by the spirulina peptide SP6in high fat diet ApoE-/-mice model: A direct infusion FT-ICR-MS basedapproach Sommella E.; Carrizzo A. et al. 2021 J. Pharm. Bio. Anal.
Comparison of lipidome profiles of Caenorhabditis elegans—results from an inter‑laboratory ring trial Spanier B.; Laurençon A. et al. 2021 Metabolomics
Metabolomic Profiling of Human Urine Samples Using LC-TIMS-QTOF Mass Spectrometry Di Poto C.; Tian X. et al. 2021 JASMS
Metabolome-based profiling of African baobab fruit (Adansonia digitata L.) using a multiplex approach of MS and NMR techniques in relation to its biological activity Baky M.H.; Badawy M.T. et al. 2021 RSC Adv.
Multiomics Method Enabled by Sequential Metabolomics and Proteomics for Human Pluripotent Stem-Cell-Derived Cardiomyocytes Bayne E.F.; Simmons A.D. et al. 2021 J. Proteome Res.
High-Resolution Mass Spectrometry for the Comprehensive Characterization of Plant-Pigment-Based Tattoos and Dyes Formulations Rubio L.; Garcia-Jares C. and Lores M. 2021 Cosmetics
Comparative sphingolipidomic analysis reveals significant differences between doxorubicin-sensitive and -resistance MCF-7 cells Shammout O.D.A.; Ashmawy N.S. et al. 2021 PLoS One
Trapped Ion Mobility Incorporated in LC–HRMS Workflows as an Integral Analytical Platform of High Sensitivity: Targeted and Untargeted 4D-Metabolomics in Extra Virgin Olive Oil Drakopoulou S.K.; Damalas D.E. et al. 2021 J. Agric. Food Chem
Circulating exosomes and gut microbiome induced insulin resistance in mice exposed to intermittent hypoxia: Effects of physical activity Khalyfa A.; Ericsson A. et al. 2021 eBioMedicine
Metabolomics approach to understand the hepatitis C virus induced hepatocellular carcinoma using LC-ESI-MS/MS Kumari S.; Ali A. et al. 2021 Arab J of Chem

MetaboScape® Bibliography 2020

Title Author Publication Link
A fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition Seybold, H.; Demetrowitsch, T.J. et al. 2020. Nature Communications
A simultaneous exploratory and quantitative amino acid and biogenic amine metabolic profling platform for rapid disease phenotyping via UPLC-QToF-MS Gray, N.; Lawler, N.G. et al. 2020. Talanta
An enhanced Isotopic Fine Structure method for exact mass analysis in discovery metabolomics: FIA-CASI-FTMS Thompson, C.J.; Witt, M. et al. 2020. J. Am. Soc. Mass Spectrom
An untargeted metabolomic approach for the putative characterization of metabolites from Scenedesmus obliquus in response to cadmium stress Mangal, V.; Nguyen, T.Q. et al. 2020. Environmental Pollution
Development of a NanoLC-MS workflow for high-sensitivity global lipidomic analysis Buzatto, A.z.; Kwon, B.K. et al. 2020. Analytica Chimica Acta
Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS Maurer, L.; Villette, C. et al. 2020 / 2021. Water Research
Effect of ultraviolet radiation on the metabolomic profiles of potentially toxic cyanobacteria Jacinavicius, F.R.; Geraldes, V. et al. 2020. FEMS Microbial Ecology
Environmental exposure to phthalates and dementia with Lewy bodies: contribution of metabolomics Agin, A.; Blanc, F. et al. 2020. J Neurol Neurosurg Psychiatry
Evaluation of the deterioration state of archaeological wooden artifacts: A nondestructive protocol based on direct analysis in real time – mass spectrometry (DART-MS) coupled to chemometrics Guo, J.; Zhang, M. et al. 2020. Analytical Chemistry
Expanding the scope of detectable microbial natural products by complementary analytical methods and cultivation systems Bader, C.D.; Haack, P.A. et al. 2020. ChemRxiv – under review
Feature-based molecular networking in the GNPS analysis environment Nothias, L.F.; Petras, D. et al. 2020. Nature Methods
Influence of abiotic stress factors on the antioxidant properties and polyphenols profile composition of green barley (Hordeum vulgare L.) Kowalczewski, P.L.; Radzikowska, D. et al. 2020. International Journal of Molecular Sciences
Investigating time dependent cocoa bean fermentation by ESI-FT-ICR mass spectrometry Kuhnert, N.; D’souza, R.N. et al. 2020. Food Research International
In vivo characterisation of the toxicological properties of DPhP, one of the main degradation product of aryl phosphate esters Ruby, S.; Marín-Sáez, J. et al. 2020. bioRxiv. under review
Large scale micropollutants and lipids screening in the sludge layers and the ecosystem of a vertical flow constructed wetland Maurer, L.; Villette, C. et al. 2020. Science of The Total Environment
Lipidomic analyses uncover apoptotic and inhibitory effects of pyrvinium pamoate on cholangiocarcinoma cells via mitochondrial membrane potential dysfunction Kittirat, Y.; Phetcharaburanin, J. et al. 2020. Research Square – under review
Lipidome alterations induced by cystic fibrosis, CFTR mutation, and lung function Buzatto, A.Z.; Abdel Jabar, M. et al. 2020. Journal of Proteome Research
Matrix solid-phase dispersion as a greener alternative to obtain bioactive extracts from Haematococcus pluvialis. Characterization by UHPLC-QToF Castillo, A.; Pereira, S. et al. 2020. RSC Advances
Metabolomics analysis reveals tissue-specific metabolite compositions in leaf blade and traps of carnivorous Nepenthes plants Dávila-Lara, A.; Rodríguez-López, C.E. et al. 2020. International Journal of Molecular Sciences
Molecular networking aided metabolomic profiling of beet leaves using three extraction solvents and in relation to its anti-obesity effects Hegazia N.M.; Radwan, R.A. et al. 2020. Journal of Advanced Research
MS Imaging-Guided Microproteomics for Spatial Omics on a Single Instrument Dewez, F.; Oejten, J. et al. 2020. Proteomics
Myxobacteria-derived outer membrane vesicles: Potential applicability against intracellular infections Goes, A.; Lapuhs, P. et al. 2020. Cells
Prenatal and early postnatal cerebral D‑aspartate depletion influences L‑amino acid pathways, bioenergetic processes, and developmental brain metabolism Grimaldi, M.; Marino, C. et al. 2020. Journal of Proteome Research
Software tools, databases and resources in metabolomics: updates from 2018 to 2019 O’Shea, K.; Misra, B.B. 2020. Metabolomics
Supercritical fluid extraction enhances discovery of secondary metabolites from Myxobacteria Bader, C.D.; Neuber, M. et al. 2020. Analytical Chemistry
The pomace extract taurisolo protects rat brain from Ischemia-reperfusion injury Lapi, D.; Stornaiuolo, M. et al. 2020. Frontiers in Cellular Neuroscience
The application of ion mobility-mass spectrometry in untargeted metabolomics: From separation to identification Luo, M.-D.; Zhou Z.-W. et al. 2020. Journal of Analysis and Testing
Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts Vasilopoulou, C.G.; Sulek, K. et al. 2020. Nature Communications
Ultrahigh-resolution mass spectrometry-based platform for plasma metabolomics applied to type 2 diabetes research Zhu, Y.; Wancewicz, B. et al. 2020. Journal of Proteome Research
Untargeted-metabolomics differentiation between poultry samples slaughtered with and without detaching spinal cord Abbas, N.; Ali, A. et al. 2020. Arabian Journal of Chemistry

MetaboScape® Bibliography 2019

Title Author Publication Link
A boost in mitochondrial activity underpins the cholesterol-lowering effect of Annurca apple polyphenols on Hepatic cells Sommella, E.; Badolati, N. et al. 2019. Nutrients
A substrate of the ABC transporter PEN3 stimulates bacterial flagellin (flg22)-induced callose deposition in Arabidopsis thaliana Matern, A.; Böttcher, C. et al. 2019. Journal of Biological Chemistry
Early Pep-13-induced immune responses are SERK3A/B dependent in potato Nietzschmann, L.; Gorzolka, K. et al. 2019. Nature Scientific Reports
Exploring the capability of LC-MS and GC-MS multi-class methods to discriminate Virgin Olive Oils from different geographical indications and to identify potential origin markers Olmo-García, L.; Wendt, K. et al. 2019. European Journal of Lipid Science and Technology
Exploring the promiscuous enzymatic activation of unnatural polyketide extender units in vitro and in vivo for monensin biosynthesis Grote M; Schulz F. 2019. CHEMBIOCHEM
Generation of a Collision Cross Section library for multi-dimensional plant metabolomics using UHPLC-Trapped Ion Mobility-MS/MS Schroeder, M.; Meyer, S.W. et al. 2019. Metabolites
Global metabolomic characterizations of Microcystis spp. highlights clonal diversity in natural bloom-forming populations and expands metabolite structural diversity Le Manach, S.; Duval, C. et al. 2019. Frontiers in Microbiology
Honey extracts inhibit PTP1B, upregulate insulin receptor expression, and enhance glucose uptake in human HepG2 cells Lori, G.; Cecchi, L. et al. 2019. Biomedicine & Pharmacotherapy
Hydroxycinnamic acids in sunflower leaves serve as UV-A screening pigments Stelzner, J.; Roemhild, R. et al. 2019. Photochemical & Photobiological Sciences
Identification of crucial bottlenecks in engineered polyketide biosynthesis Grote, M.; Kushnir, S. et al. 2019. Organic & Biomolecular Chemistry
Impact of Cr(VI) on the oxidation of polyunsaturated fatty acids in Helianthus annuus roots studied by metabolomic tools Gonzalez Ibarra, A.A.; Wrobel, K. et al. 2019. Chemosphere
In situ localization of micropollutants and associated stress response in Populus nigra leaves Villette, C.; Maurer, Delecolle, J. et al. 2019. Environment International
Insights into the diversity of secondary metabolites of planktothrix using a biphasic approach combining global genomics and metabolomics Tiam, S.K.; Gugger, M. et al. 2019. Toxins
JASSY, a chloroplast outer membrane protein required for jasmonate biosynthesis Guana, L.; Denkert, N. et al. 2019. PNAS
Plastoglobular protein 18 is involved in chloroplast function and thylakoid formation Espinoza-Corral, Heinz, S.; Klingl, A. et al. 2019. Journal of Experimental Botany
Semi-polar root exudates in natural grassland communities Dietz, S.; Herz, K. et al. 2019. Ecology and Evolution
UHPLC-MS Analyses of Plant Flavonoids Lei, Z.; Sumner, B.W. et al. 2019. Current Protocols in Plant Biology
Xenobiotics metabolization in Salix alba leaves uncovered by mass spectrometry imaging Villette, C.; Maurer, L. et al. 2019. Metabolomics


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