MetaboScape® Bibliography


MetaboScape® Bibliography 2022

Title Author Publication Link
Multi-Omics Analysis Revealed a Significant Alteration of Critical Metabolic Pathways Due to Sorafenib-Resistance in Hep3B Cell Lines Abushawish K.Y.I.; Soliman S.S.M. et al. 2022 Int. J. Mol. Sci.
Untargeted Metabolomics of Breast Cancer Cells MCF-7 and SkBr3 Treated With Tamoxifen/Trastuzumab Sharaf B.M.; Giddey A.D. et al. 2022 Cancer Genomics & Proteomics
Untargeted lipidomics reveals specific lipid profiles in COVID-19 patients with different severity from Campania region (Italy) Ciccarelli M.; Merciai F. et al. 2022 J. Pharm. Bio. Anal.
Development and application of a fast ultra-high performance liquid chromatography-trapped ion mobility mass spectrometry method for untargeted lipidomics Merciai F.; Musella S. et al. 2022 J Chrom A
Untargeted ultra‑high‑resolution mass spectrometry metabolomic profiling of blood serum in bladder cancer Nizioł J.; Ossoliński K. et al. 2022 Nature Scientific Reports
Untargeted Metabolomic Plasma Profiling of Emirati Dialysis Patients with Diabetes versus Non-Diabetic: A Pilot Study Banimfreg B.H.; Alshraideh H. et al. 2022 Biomolecules
Impact of Skin Tissue Collection Method on Downstream MALDI-Imaging Yadav M.; Chaudhary P.P. et al. 2022 Metabolites
Thorough Investigation of the Phenolic Profile of Reputable Greek Honey Varieties: Varietal Discrimination and Floral Markers Identification Using Liquid Chromatography–High-Resolution Mass Spectrometry Koulis G.A.; Tsagkaris A.S. et al. 2022 Molecules
Structural amyloid plaque polymorphism is associated with distinct lipid accumulations revealed by trapped ion mobility mass spectrometry imaging Michno W.; Wherli P.M. et al. 2022 J of Neurochemistry
Bioprospecting the Metabolome of Plant Urtica dioica L.: A Fast Dereplication and Annotation Workflow in Plant Metabolomics Bhattarai K.; Paudel B. et al. 2022 Evidence-Based Complementary and Alternative Medicine
Spatially resolved characterization of tissue metabolic compartments in fasted and high-fat diet livers Stopka S.A.; van der Reest J. et al. 2022 PLoS One
Analysis and Comparison of Mouse and Human Brain Gangliosides via Two-Stage Matching of MS/MS Spectra Huang F.; Bailey L.S. et al. 2022 ACS Omega
Non-Targeted Serum Lipidomics Analysis and Potential Biomarkers of Laryngeal Cancer Based on UHPLC-QTOF-MS Wang H.; Luo Y. et al. 2022 Metabolites
Metabolism Reorganization in Kale (Brassica oleracea L. var acephala) Populations with Divergent Glucosinolate Content under Thermal Stresses Díaz-Urbano M.; Velasco P. et al. 2022 Agronomy


MetaboScape® Bibliography 2021

Title Author Publication Link
Expanding the Scope of Detectable Microbial Natural Products by Complementary Analytical Methods and Cultivation Systems Bader C.D.; Haack P.A. et al. 2021 J. Nat. Prod.
Metabolic Dynamics of In Vitro CD8+ T Cell Activation Edwards-Hicks J.; Mitterer M. et al. 2021 Metabolites
Complementing Matrix-Assisted Laser Desorption Ionization-Mass Spectrometry Imaging with Chromatography Data for Improved Assignment of Isobaric and Isomeric Phospholipids Utilizing Trapped Ion Mobility-Mass Spectrometry Helmer P.O.; Nordhorn I.D.; et al. 2021 Anal. Chem.
Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS Maurer L.; Villette C. et al. 2021 Water Res.
Analysis of the metabolic switch induced by the spirulina peptide SP6in high fat diet ApoE-/-mice model: A direct infusion FT-ICR-MS basedapproach Sommella E.; Carrizzo A. et al. 2021 J. Pharm. Bio. Anal.
Comparison of lipidome profiles of Caenorhabditis elegans—results from an inter‑laboratory ring trial Spanier B.; Laurençon A. et al. 2021 Metabolomics
Metabolomic Profiling of Human Urine Samples Using LC-TIMS-QTOF Mass Spectrometry Di Poto C.; Tian X. et al. 2021 JASMS
Metabolome-based profiling of African baobab fruit (Adansonia digitata L.) using a multiplex approach of MS and NMR techniques in relation to its biological activity Baky M.H.; Badawy M.T. et al. 2021 RSC Adv.
Multiomics Method Enabled by Sequential Metabolomics and Proteomics for Human Pluripotent Stem-Cell-Derived Cardiomyocytes Bayne E.F.; Simmons A.D. et al. 2021 J. Proteome Res.
High-Resolution Mass Spectrometry for the Comprehensive Characterization of Plant-Pigment-Based Tattoos and Dyes Formulations Rubio L.; Garcia-Jares C. and Lores M. 2021 Cosmetics
Comparative sphingolipidomic analysis reveals significant differences between doxorubicin-sensitive and -resistance MCF-7 cells Shammout O.D.A.; Ashmawy N.S. et al. 2021 PLoS One
Trapped Ion Mobility Incorporated in LC–HRMS Workflows as an Integral Analytical Platform of High Sensitivity: Targeted and Untargeted 4D-Metabolomics in Extra Virgin Olive Oil Drakopoulou S.K.; Damalas D.E. et al. 2021 J. Agric. Food Chem
Circulating exosomes and gut microbiome induced insulin resistance in mice exposed to intermittent hypoxia: Effects of physical activity Khalyfa A.; Ericsson A. et al. 2021 eBioMedicine
Metabolomics approach to understand the hepatitis C virus induced hepatocellular carcinoma using LC-ESI-MS/MS Kumari S.; Ali A. et al. 2021 Arab J of Chem


MetaboScape® Bibliography 2020

Title Author Publication Link
A fungal pathogen induces systemic susceptibility and systemic shifts in wheat metabolome and microbiome composition Seybold, H.; Demetrowitsch, T.J. et al. 2020. Nature Communications
A simultaneous exploratory and quantitative amino acid and biogenic amine metabolic profling platform for rapid disease phenotyping via UPLC-QToF-MS Gray, N.; Lawler, N.G. et al. 2020. Talanta
An enhanced Isotopic Fine Structure method for exact mass analysis in discovery metabolomics: FIA-CASI-FTMS Thompson, C.J.; Witt, M. et al. 2020. J. Am. Soc. Mass Spectrom
An untargeted metabolomic approach for the putative characterization of metabolites from Scenedesmus obliquus in response to cadmium stress Mangal, V.; Nguyen, T.Q. et al. 2020. Environmental Pollution
Development of a NanoLC-MS workflow for high-sensitivity global lipidomic analysis Buzatto, A.z.; Kwon, B.K. et al. 2020. Analytica Chimica Acta
Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS Maurer, L.; Villette, C. et al. 2020 / 2021. Water Research
Effect of ultraviolet radiation on the metabolomic profiles of potentially toxic cyanobacteria Jacinavicius, F.R.; Geraldes, V. et al. 2020. FEMS Microbial Ecology
Environmental exposure to phthalates and dementia with Lewy bodies: contribution of metabolomics Agin, A.; Blanc, F. et al. 2020. J Neurol Neurosurg Psychiatry
Evaluation of the deterioration state of archaeological wooden artifacts: A nondestructive protocol based on direct analysis in real time – mass spectrometry (DART-MS) coupled to chemometrics Guo, J.; Zhang, M. et al. 2020. Analytical Chemistry
Expanding the scope of detectable microbial natural products by complementary analytical methods and cultivation systems Bader, C.D.; Haack, P.A. et al. 2020. ChemRxiv – under review
Feature-based molecular networking in the GNPS analysis environment Nothias, L.F.; Petras, D. et al. 2020. Nature Methods
Influence of abiotic stress factors on the antioxidant properties and polyphenols profile composition of green barley (Hordeum vulgare L.) Kowalczewski, P.L.; Radzikowska, D. et al. 2020. International Journal of Molecular Sciences
Investigating time dependent cocoa bean fermentation by ESI-FT-ICR mass spectrometry Kuhnert, N.; D’souza, R.N. et al. 2020. Food Research International
In vivo characterisation of the toxicological properties of DPhP, one of the main degradation product of aryl phosphate esters Ruby, S.; Marín-Sáez, J. et al. 2020. bioRxiv. under review
Large scale micropollutants and lipids screening in the sludge layers and the ecosystem of a vertical flow constructed wetland Maurer, L.; Villette, C. et al. 2020. Science of The Total Environment
Lipidomic analyses uncover apoptotic and inhibitory effects of pyrvinium pamoate on cholangiocarcinoma cells via mitochondrial membrane potential dysfunction Kittirat, Y.; Phetcharaburanin, J. et al. 2020. Research Square – under review
Lipidome alterations induced by cystic fibrosis, CFTR mutation, and lung function Buzatto, A.Z.; Abdel Jabar, M. et al. 2020. Journal of Proteome Research
Matrix solid-phase dispersion as a greener alternative to obtain bioactive extracts from Haematococcus pluvialis. Characterization by UHPLC-QToF Castillo, A.; Pereira, S. et al. 2020. RSC Advances
Metabolomics analysis reveals tissue-specific metabolite compositions in leaf blade and traps of carnivorous Nepenthes plants Dávila-Lara, A.; Rodríguez-López, C.E. et al. 2020. International Journal of Molecular Sciences
Molecular networking aided metabolomic profiling of beet leaves using three extraction solvents and in relation to its anti-obesity effects Hegazia N.M.; Radwan, R.A. et al. 2020. Journal of Advanced Research
MS Imaging-Guided Microproteomics for Spatial Omics on a Single Instrument Dewez, F.; Oejten, J. et al. 2020. Proteomics
Myxobacteria-derived outer membrane vesicles: Potential applicability against intracellular infections Goes, A.; Lapuhs, P. et al. 2020. Cells
Prenatal and early postnatal cerebral D‑aspartate depletion influences L‑amino acid pathways, bioenergetic processes, and developmental brain metabolism Grimaldi, M.; Marino, C. et al. 2020. Journal of Proteome Research
Software tools, databases and resources in metabolomics: updates from 2018 to 2019 O’Shea, K.; Misra, B.B. 2020. Metabolomics
Supercritical fluid extraction enhances discovery of secondary metabolites from Myxobacteria Bader, C.D.; Neuber, M. et al. 2020. Analytical Chemistry
The pomace extract taurisolo protects rat brain from Ischemia-reperfusion injury Lapi, D.; Stornaiuolo, M. et al. 2020. Frontiers in Cellular Neuroscience
The application of ion mobility-mass spectrometry in untargeted metabolomics: From separation to identification Luo, M.-D.; Zhou Z.-W. et al. 2020. Journal of Analysis and Testing
Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts Vasilopoulou, C.G.; Sulek, K. et al. 2020. Nature Communications
Ultrahigh-resolution mass spectrometry-based platform for plasma metabolomics applied to type 2 diabetes research Zhu, Y.; Wancewicz, B. et al. 2020. Journal of Proteome Research
Untargeted-metabolomics differentiation between poultry samples slaughtered with and without detaching spinal cord Abbas, N.; Ali, A. et al. 2020. Arabian Journal of Chemistry


MetaboScape® Bibliography 2019

Title Author Publication Link
A boost in mitochondrial activity underpins the cholesterol-lowering effect of Annurca apple polyphenols on Hepatic cells Sommella, E.; Badolati, N. et al. 2019. Nutrients
A substrate of the ABC transporter PEN3 stimulates bacterial flagellin (flg22)-induced callose deposition in Arabidopsis thaliana Matern, A.; Böttcher, C. et al. 2019. Journal of Biological Chemistry
Early Pep-13-induced immune responses are SERK3A/B dependent in potato Nietzschmann, L.; Gorzolka, K. et al. 2019. Nature Scientific Reports
Exploring the capability of LC-MS and GC-MS multi-class methods to discriminate Virgin Olive Oils from different geographical indications and to identify potential origin markers Olmo-García, L.; Wendt, K. et al. 2019. European Journal of Lipid Science and Technology
Exploring the promiscuous enzymatic activation of unnatural polyketide extender units in vitro and in vivo for monensin biosynthesis Grote M; Schulz F. 2019. CHEMBIOCHEM
Generation of a Collision Cross Section library for multi-dimensional plant metabolomics using UHPLC-Trapped Ion Mobility-MS/MS Schroeder, M.; Meyer, S.W. et al. 2019. Metabolites
Global metabolomic characterizations of Microcystis spp. highlights clonal diversity in natural bloom-forming populations and expands metabolite structural diversity Le Manach, S.; Duval, C. et al. 2019. Frontiers in Microbiology
Honey extracts inhibit PTP1B, upregulate insulin receptor expression, and enhance glucose uptake in human HepG2 cells Lori, G.; Cecchi, L. et al. 2019. Biomedicine & Pharmacotherapy
Hydroxycinnamic acids in sunflower leaves serve as UV-A screening pigments Stelzner, J.; Roemhild, R. et al. 2019. Photochemical & Photobiological Sciences
Identification of crucial bottlenecks in engineered polyketide biosynthesis Grote, M.; Kushnir, S. et al. 2019. Organic & Biomolecular Chemistry
Impact of Cr(VI) on the oxidation of polyunsaturated fatty acids in Helianthus annuus roots studied by metabolomic tools Gonzalez Ibarra, A.A.; Wrobel, K. et al. 2019. Chemosphere
In situ localization of micropollutants and associated stress response in Populus nigra leaves Villette, C.; Maurer, Delecolle, J. et al. 2019. Environment International
Insights into the diversity of secondary metabolites of planktothrix using a biphasic approach combining global genomics and metabolomics Tiam, S.K.; Gugger, M. et al. 2019. Toxins
JASSY, a chloroplast outer membrane protein required for jasmonate biosynthesis Guana, L.; Denkert, N. et al. 2019. PNAS
Plastoglobular protein 18 is involved in chloroplast function and thylakoid formation Espinoza-Corral, Heinz, S.; Klingl, A. et al. 2019. Journal of Experimental Botany
Semi-polar root exudates in natural grassland communities Dietz, S.; Herz, K. et al. 2019. Ecology and Evolution
UHPLC-MS Analyses of Plant Flavonoids Lei, Z.; Sumner, B.W. et al. 2019. Current Protocols in Plant Biology
Xenobiotics metabolization in Salix alba leaves uncovered by mass spectrometry imaging Villette, C.; Maurer, L. et al. 2019. Metabolomics


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